Flowchart Updated
This commit is contained in:
mukesh13
@ -1,96 +1,49 @@
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import React from 'react';
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import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
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const EnrichmentPipeline = ({
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title = "Bioinformatics Pipeline",
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leftSteps = [
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"Raw Sequencing Data (fastq files)",
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"Quality Control and Preprocessing of Data",
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"High Quality Sequencing Data (fastq file)",
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"Alignment to Reference Genome"
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],
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rightSteps = [
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"Downstream Advanced Analysis",
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"Annotation",
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"Variants Calling - SNVs, Indels, CNVs",
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"Mark Duplicates and Post-Processing"
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],
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svgContent = null, // Pass your SVG content here as JSX
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svgUrl = "/images/flowchart/resequencing.svg",
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backgroundColor = "bg-gray-50",
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cardColor = "bg-gray-300",
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textColor = "text-teal-600",
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arrowColor = "text-gray-600",
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textColor = "text-gray-700",
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className = "",
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cardClassName = "",
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titleClassName = ""
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titleClassName = "",
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svgClassName = "",
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containerClassName = ""
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}) => {
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// Combine steps for mobile layout
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const mobileSteps = [...leftSteps, ...rightSteps.slice().reverse()];
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return (
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<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
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<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
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<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
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<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
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<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
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{title}
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</h2>
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{/* Pipeline Flowchart */}
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{/* SVG Flowchart Container */}
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<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
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<div className="flex justify-center">
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<div className="w-full max-w-5xl">
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<div className="relative">
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{/* Mobile Layout - Single Column */}
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<div className="block sm:hidden">
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<div className="flex flex-col items-center space-y-3">
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{mobileSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
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<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < mobileSteps.length - 1 && (
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<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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</div>
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</div>
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{/* Tablet and Desktop Layout - Two Columns */}
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<div className="hidden sm:block">
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<div className="grid grid-cols-2 gap-4 sm:gap-6 lg:gap-8">
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{/* Left Column */}
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<div className="flex flex-col items-center space-y-2 sm:space-y-3">
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{leftSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
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<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < leftSteps.length - 1 && (
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<ArrowDown className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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</div>
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{/* Right Column */}
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<div className="flex flex-col items-center space-y-2 sm:space-y-3">
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{rightSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
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<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < rightSteps.length - 1 && (
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<ArrowUp className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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<div className="w-full max-w-6xl">
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{/* SVG Container with responsive sizing */}
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<div className={`w-full ${svgClassName}`}>
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{svgUrl ? (
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// If SVG URL/path is provided
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<img
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src={svgUrl}
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alt="Flowchart diagram"
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className="w-full h-auto object-contain"
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/>
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) : svgContent ? (
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// If SVG content is provided as JSX
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<div className="w-full">
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<div className="w-full">
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{svgContent}
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</div>
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</div>
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{/* Horizontal Arrow positioned between Primary and Secondary Assembly */}
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<div className="absolute bottom-2 sm:bottom-4 lg:bottom-[0.7rem] left-1/2 transform -translate-x-1/2 flex items-center justify-center">
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<ArrowRight className={`w-6 h-6 sm:w-8 sm:h-8 ${arrowColor}`} />
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) : (
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// Fallback message
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<div className="flex items-center justify-center h-40 text-gray-500">
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<p>Please provide SVG content or URL</p>
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</div>
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</div>
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)}
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</div>
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</div>
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</div>
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@ -1,126 +1,49 @@
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import React from 'react';
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import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
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const EpigenomicsPipeline = ({
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title = "Bioinformatics Pipeline",
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leftSteps = [
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"Raw Sequencing Data (fastq files)",
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"Quality Control and Preprocessing of Data",
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"High Quality Sequencing Data (fastq file)",
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"Aligned to Reference Genome"
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],
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middleSteps = [
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"Downstream Advanced Analysis",
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"DMR Annotation",
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"DMR Identification",
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"Peak Calling"
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],
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rightSteps = [
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"Distribution in genes & repeats",
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"Methylated Distribution",
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"Motif Identification",
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"Relationship with gene expression",
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"Go clustering",
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"Pathway analysis"
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],
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svgContent = null, // Pass your SVG content here as JSX
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svgUrl = "/images/flowchart/epigenomics.svg",
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backgroundColor = "bg-gray-50",
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cardColor = "bg-gray-300",
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textColor = "text-teal-600",
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arrowColor = "text-gray-600",
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textColor = "text-gray-700",
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className = "",
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cardClassName = "",
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titleClassName = ""
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titleClassName = "",
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svgClassName = "",
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containerClassName = ""
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}) => {
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// Combine steps for mobile layout
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const mobileSteps = [...leftSteps, ...middleSteps, ...rightSteps];
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return (
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<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
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<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
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<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
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<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
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<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
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{title}
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</h2>
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{/* Pipeline Flowchart */}
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{/* SVG Flowchart Container */}
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<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
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<div className="flex justify-center">
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<div className="w-full max-w-7xl">
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<div className="relative">
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{/* Mobile Layout - Single Column */}
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<div className="block lg:hidden">
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<div className="flex flex-col items-center space-y-3">
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{mobileSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
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<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < mobileSteps.length - 1 && (
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<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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</div>
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</div>
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{/* Desktop Layout - Three Columns */}
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<div className="hidden lg:block">
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<div className="grid grid-cols-3 gap-6 lg:gap-8">
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{/* Left Column */}
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<div className="flex flex-col items-center space-y-3">
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{leftSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-4 w-full max-w-76 text-center border ${cardClassName}`} style={{maxWidth: '19rem'}}>
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<h3 className={`text-sm font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < leftSteps.length - 1 && (
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<ArrowDown className={`w-6 h-6 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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</div>
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{/* Middle Column */}
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<div className="flex flex-col items-center space-y-3">
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{middleSteps.map((step, index) => (
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<React.Fragment key={index}>
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<div className={`${cardColor} rounded-lg p-4 w-full max-w-76 text-center border ${cardClassName}`} style={{maxWidth: '19rem'}}>
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<h3 className={`text-sm font-medium ${textColor}`}>{step}</h3>
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</div>
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{index < middleSteps.length - 1 && (
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<ArrowUp className={`w-6 h-6 ${arrowColor}`} />
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)}
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</React.Fragment>
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))}
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</div>
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{/* Right Column */}
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<div className="flex flex-col items-center justify-center">
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<div className={`${cardColor} rounded-lg p-12 w-full max-w-76 text-center border ${cardClassName}`} style={{maxWidth: '19rem'}}>
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<div className="space-y-6">
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{rightSteps.map((step, index) => (
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<div key={index} className={`text-sm font-medium ${textColor}`}>
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{step}
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</div>
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))}
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</div>
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</div>
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<div className="w-full max-w-6xl">
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{/* SVG Container with responsive sizing */}
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<div className={`w-full ${svgClassName}`}>
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{svgUrl ? (
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// If SVG URL/path is provided
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<img
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src={svgUrl}
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alt="Flowchart diagram"
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className="w-full h-auto object-contain"
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/>
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) : svgContent ? (
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// If SVG content is provided as JSX
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<div className="w-full">
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<div className="w-full">
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{svgContent}
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</div>
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</div>
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{/* Horizontal Arrows */}
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{/* Arrow from Aligned to Reference Genome to Peak Calling */}
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<div className="absolute bottom-4 left-1/3 transform -translate-x-1/2">
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<ArrowRight className={`w-8 h-8 ${arrowColor}`} />
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) : (
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// Fallback message
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<div className="flex items-center justify-center h-40 text-gray-500">
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<p>Please provide SVG content or URL</p>
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</div>
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{/* Arrow from DMR Annotation to right box */}
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<div className="absolute top-28 left-2/3 transform -translate-x-1/2">
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<ArrowRight className={`w-8 h-8 ${arrowColor}`} />
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</div>
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{/* Arrow from Peak Calling to right box */}
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<div className="absolute bottom-4 left-2/3 transform -translate-x-1/2">
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<ArrowRight className={`w-8 h-8 ${arrowColor}`} />
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</div>
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</div>
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)}
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</div>
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</div>
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</div>
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@ -1,96 +1,49 @@
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import React from 'react';
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import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
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const GenomeMappingPipeline = ({
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title = "Bioinformatics Pipeline",
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leftSteps = [
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"Raw Sequencing Data (fastq files)",
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"Quality Control and Preprocessing of Data",
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"High Quality Sequencing Data (fastq file)",
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"Alignment to Reference Genome"
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],
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rightSteps = [
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"Evolutionary Analysis",
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"Annotation",
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"Variants Calling - structural variants and genomic rearrangements",
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"Post-Processing"
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],
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svgContent = null, // Pass your SVG content here as JSX
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svgUrl = "/images/flowchart/genoemapping.svg",
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backgroundColor = "bg-gray-50",
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cardColor = "bg-gray-300",
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textColor = "text-teal-600",
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arrowColor = "text-gray-600",
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textColor = "text-gray-700",
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className = "",
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cardClassName = "",
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titleClassName = ""
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titleClassName = "",
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svgClassName = "",
|
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containerClassName = ""
|
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}) => {
|
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// Combine steps for mobile layout
|
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const mobileSteps = [...leftSteps, ...rightSteps.slice().reverse()];
|
||||
|
||||
return (
|
||||
<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
|
||||
<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
|
||||
<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
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<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
|
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<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
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{title}
|
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</h2>
|
||||
|
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{/* Pipeline Flowchart */}
|
||||
{/* SVG Flowchart Container */}
|
||||
<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
|
||||
<div className="flex justify-center">
|
||||
<div className="w-full max-w-5xl">
|
||||
<div className="relative">
|
||||
{/* Mobile Layout - Single Column */}
|
||||
<div className="block sm:hidden">
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{mobileSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < mobileSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Tablet and Desktop Layout - Two Columns */}
|
||||
<div className="hidden sm:block">
|
||||
<div className="grid grid-cols-2 gap-4 sm:gap-6 lg:gap-8">
|
||||
{/* Left Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{leftSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < leftSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Right Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{rightSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < rightSteps.length - 1 && (
|
||||
<ArrowUp className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
<div className="w-full max-w-6xl">
|
||||
{/* SVG Container with responsive sizing */}
|
||||
<div className={`w-full ${svgClassName}`}>
|
||||
{svgUrl ? (
|
||||
// If SVG URL/path is provided
|
||||
<img
|
||||
src={svgUrl}
|
||||
alt="Flowchart diagram"
|
||||
className="w-full h-auto object-contain"
|
||||
/>
|
||||
) : svgContent ? (
|
||||
// If SVG content is provided as JSX
|
||||
<div className="w-full">
|
||||
<div className="w-full">
|
||||
{svgContent}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Horizontal Arrow positioned between Primary and Secondary Assembly */}
|
||||
<div className="absolute bottom-2 sm:bottom-4 lg:bottom-[0.7rem] left-1/2 transform -translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-6 h-6 sm:w-8 sm:h-8 ${arrowColor}`} />
|
||||
) : (
|
||||
// Fallback message
|
||||
<div className="flex items-center justify-center h-40 text-gray-500">
|
||||
<p>Please provide SVG content or URL</p>
|
||||
</div>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
@ -1,124 +1,49 @@
|
||||
import React from 'react';
|
||||
import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
|
||||
|
||||
const MetagenomicsPipeline = ({
|
||||
title = "Bioinformatics Pipeline",
|
||||
leftColumn = [
|
||||
"Raw Sequencing Data (fastq files)",
|
||||
"Quality Control and Preprocessing of Data",
|
||||
"High Quality Sequencing Data (fastq file)",
|
||||
"Alignment to Host Genome"
|
||||
],
|
||||
middleColumn = [
|
||||
"Assembly Validation",
|
||||
"Secondary Assembly (Scaffolds)",
|
||||
"Primary Assembly (Contigs) using Unaligned Data",
|
||||
"Remove Aligned reads to Host Genome and Retain only Unaligned Reads"
|
||||
],
|
||||
rightColumn = [
|
||||
"Gene Prediction and Gene Annotation",
|
||||
"Downstream Advanced Analysis"
|
||||
],
|
||||
svgContent = null, // Pass your SVG content here as JSX
|
||||
svgUrl = "/images/flowchart/metagenomics.svg",
|
||||
backgroundColor = "bg-gray-50",
|
||||
cardColor = "bg-gray-300",
|
||||
textColor = "text-teal-600",
|
||||
arrowColor = "text-gray-600",
|
||||
textColor = "text-gray-700",
|
||||
className = "",
|
||||
cardClassName = "",
|
||||
titleClassName = ""
|
||||
titleClassName = "",
|
||||
svgClassName = "",
|
||||
containerClassName = ""
|
||||
}) => {
|
||||
// Combine all steps for mobile layout
|
||||
const mobileSteps = [
|
||||
...leftColumn,
|
||||
...middleColumn.slice().reverse(),
|
||||
...rightColumn
|
||||
];
|
||||
|
||||
return (
|
||||
<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
|
||||
<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
|
||||
<h2 className={`text-gray-600 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
|
||||
<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
{title}
|
||||
</h2>
|
||||
|
||||
{/* Pipeline Flowchart */}
|
||||
{/* SVG Flowchart Container */}
|
||||
<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
|
||||
<div className="flex justify-center">
|
||||
<div className="w-full max-w-6xl">
|
||||
<div className="relative">
|
||||
{/* Mobile Layout - Single Column */}
|
||||
<div className="block lg:hidden">
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{mobileSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < mobileSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Desktop Layout - Three Columns */}
|
||||
<div className="hidden lg:block">
|
||||
<div className="grid grid-cols-3 gap-6 lg:gap-10">
|
||||
{/* Left Column */}
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{leftColumn.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-4 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < leftColumn.length - 1 && (
|
||||
<ArrowDown className={`w-6 h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Middle Column */}
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{middleColumn.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-4 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < middleColumn.length - 1 && (
|
||||
<ArrowUp className={`w-6 h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Right Column */}
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{rightColumn.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-4 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < rightColumn.length - 1 && (
|
||||
<ArrowDown className={`w-6 h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
{/* SVG Container with responsive sizing */}
|
||||
<div className={`w-full ${svgClassName}`}>
|
||||
{svgUrl ? (
|
||||
// If SVG URL/path is provided
|
||||
<img
|
||||
src={svgUrl}
|
||||
alt="Flowchart diagram"
|
||||
className="w-full h-auto object-contain"
|
||||
/>
|
||||
) : svgContent ? (
|
||||
// If SVG content is provided as JSX
|
||||
<div className="w-full">
|
||||
<div className="w-full">
|
||||
{svgContent}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Horizontal Arrows */}
|
||||
{/* Arrow from left to middle column */}
|
||||
<div className="absolute bottom-8 left-1/3 transform -translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-8 h-8 ${arrowColor}`} />
|
||||
) : (
|
||||
// Fallback message
|
||||
<div className="flex items-center justify-center h-40 text-gray-500">
|
||||
<p>Please provide SVG content or URL</p>
|
||||
</div>
|
||||
|
||||
{/* Arrow from middle to right column */}
|
||||
<div className="absolute top-4 right-1/3 transform translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-8 h-8 ${arrowColor}`} />
|
||||
</div>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
@ -1,96 +1,49 @@
|
||||
import React from 'react';
|
||||
import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
|
||||
|
||||
const SingleCellPipeline = ({
|
||||
title = "Bioinformatics Pipeline",
|
||||
leftSteps = [
|
||||
"Raw Sequencing Data (fastq files)",
|
||||
"Quality Control and Preprocessing of Data",
|
||||
"High Quality Sequencing Data (fastq file)",
|
||||
"Alignment to Reference Genome"
|
||||
],
|
||||
rightSteps = [
|
||||
"Evolutionary Analysis",
|
||||
"Annotation",
|
||||
"Variants Calling - SNVs, Indels, CNVs",
|
||||
"Mark Duplicates and Post-Processing"
|
||||
],
|
||||
svgContent = null, // Pass your SVG content here as JSX
|
||||
svgUrl = "/images/flowchart/singlecell.svg",
|
||||
backgroundColor = "bg-gray-50",
|
||||
cardColor = "bg-gray-300",
|
||||
textColor = "text-teal-600",
|
||||
arrowColor = "text-gray-600",
|
||||
textColor = "text-gray-700",
|
||||
className = "",
|
||||
cardClassName = "",
|
||||
titleClassName = ""
|
||||
titleClassName = "",
|
||||
svgClassName = "",
|
||||
containerClassName = ""
|
||||
}) => {
|
||||
// Combine steps for mobile layout
|
||||
const mobileSteps = [...leftSteps, ...rightSteps.slice().reverse()];
|
||||
|
||||
return (
|
||||
<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
|
||||
<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
|
||||
<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
|
||||
<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
{title}
|
||||
</h2>
|
||||
|
||||
{/* Pipeline Flowchart */}
|
||||
{/* SVG Flowchart Container */}
|
||||
<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
|
||||
<div className="flex justify-center">
|
||||
<div className="w-full max-w-5xl">
|
||||
<div className="relative">
|
||||
{/* Mobile Layout - Single Column */}
|
||||
<div className="block sm:hidden">
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{mobileSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < mobileSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Tablet and Desktop Layout - Two Columns */}
|
||||
<div className="hidden sm:block">
|
||||
<div className="grid grid-cols-2 gap-4 sm:gap-6 lg:gap-8">
|
||||
{/* Left Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{leftSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < leftSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Right Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{rightSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < rightSteps.length - 1 && (
|
||||
<ArrowUp className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
<div className="w-full max-w-6xl">
|
||||
{/* SVG Container with responsive sizing */}
|
||||
<div className={`w-full ${svgClassName}`}>
|
||||
{svgUrl ? (
|
||||
// If SVG URL/path is provided
|
||||
<img
|
||||
src={svgUrl}
|
||||
alt="Flowchart diagram"
|
||||
className="w-full h-auto object-contain"
|
||||
/>
|
||||
) : svgContent ? (
|
||||
// If SVG content is provided as JSX
|
||||
<div className="w-full">
|
||||
<div className="w-full">
|
||||
{svgContent}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Horizontal Arrow positioned between Primary and Secondary Assembly */}
|
||||
<div className="absolute bottom-2 sm:bottom-4 lg:bottom-[0.7rem] left-1/2 transform -translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-6 h-6 sm:w-8 sm:h-8 ${arrowColor}`} />
|
||||
) : (
|
||||
// Fallback message
|
||||
<div className="flex items-center justify-center h-40 text-gray-500">
|
||||
<p>Please provide SVG content or URL</p>
|
||||
</div>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
@ -1,96 +1,49 @@
|
||||
import React from 'react';
|
||||
import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
|
||||
|
||||
const WGSDeNovoPipeline = ({
|
||||
title = "Bioinformatics Pipeline",
|
||||
leftSteps = [
|
||||
"Raw Sequencing Data (fastq files)",
|
||||
"Quality Control and Preprocessing of Data",
|
||||
"High Quality Sequencing Data (fastq file)",
|
||||
"Primary Assembly (Contigs)"
|
||||
],
|
||||
rightSteps = [
|
||||
"Downstream Advanced Analysis",
|
||||
"Gene Prediction and Gene Annotation",
|
||||
"Assembly Validation",
|
||||
"Secondary Assembly (Scaffolds)"
|
||||
],
|
||||
svgContent = null, // Pass your SVG content here as JSX
|
||||
svgUrl = "/images/flowchart/denovo.svg",
|
||||
backgroundColor = "bg-gray-50",
|
||||
cardColor = "bg-gray-300",
|
||||
textColor = "text-teal-600",
|
||||
arrowColor = "text-gray-600",
|
||||
textColor = "text-gray-700",
|
||||
className = "",
|
||||
cardClassName = "",
|
||||
titleClassName = ""
|
||||
titleClassName = "",
|
||||
svgClassName = "",
|
||||
containerClassName = ""
|
||||
}) => {
|
||||
// Combine steps for mobile layout
|
||||
const mobileSteps = [...leftSteps, ...rightSteps.slice().reverse()];
|
||||
|
||||
return (
|
||||
<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
|
||||
<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
|
||||
<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
|
||||
<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
{title}
|
||||
</h2>
|
||||
|
||||
{/* Pipeline Flowchart */}
|
||||
{/* SVG Flowchart Container */}
|
||||
<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
|
||||
<div className="flex justify-center">
|
||||
<div className="w-full max-w-5xl">
|
||||
<div className="relative">
|
||||
{/* Mobile Layout - Single Column */}
|
||||
<div className="block sm:hidden">
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{mobileSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < mobileSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Tablet and Desktop Layout - Two Columns */}
|
||||
<div className="hidden sm:block">
|
||||
<div className="grid grid-cols-2 gap-4 sm:gap-6 lg:gap-8">
|
||||
{/* Left Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{leftSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < leftSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Right Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{rightSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < rightSteps.length - 1 && (
|
||||
<ArrowUp className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
<div className="w-full max-w-6xl">
|
||||
{/* SVG Container with responsive sizing */}
|
||||
<div className={`w-full ${svgClassName}`}>
|
||||
{svgUrl ? (
|
||||
// If SVG URL/path is provided
|
||||
<img
|
||||
src={svgUrl}
|
||||
alt="Flowchart diagram"
|
||||
className="w-full h-auto object-contain"
|
||||
/>
|
||||
) : svgContent ? (
|
||||
// If SVG content is provided as JSX
|
||||
<div className="w-full">
|
||||
<div className="w-full">
|
||||
{svgContent}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Horizontal Arrow positioned between Primary and Secondary Assembly */}
|
||||
<div className="absolute bottom-2 sm:bottom-4 lg:bottom-[0.7rem] left-1/2 transform -translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-6 h-6 sm:w-8 sm:h-8 ${arrowColor}`} />
|
||||
) : (
|
||||
// Fallback message
|
||||
<div className="flex items-center justify-center h-40 text-gray-500">
|
||||
<p>Please provide SVG content or URL</p>
|
||||
</div>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
@ -1,96 +1,49 @@
|
||||
import React from 'react';
|
||||
import { ArrowDown, ArrowRight, ArrowUp } from 'lucide-react';
|
||||
|
||||
const WGSResequencingPipeline = ({
|
||||
title = "Bioinformatics Pipeline",
|
||||
leftSteps = [
|
||||
"Raw Sequencing Data (fastq files)",
|
||||
"Quality Control and Preprocessing of Data",
|
||||
"High Quality Sequencing Data (fastq file)",
|
||||
"Alignment to Reference Genome"
|
||||
],
|
||||
rightSteps = [
|
||||
"Downstream Advanced Analysis",
|
||||
"Annotation",
|
||||
"Variants Calling - SNVs, Indels, CNVs",
|
||||
"Mark Duplicates and Post-Processing"
|
||||
],
|
||||
svgContent = null, // Pass your SVG content here as JSX
|
||||
svgUrl = "/images/flowchart/resequencing.svg",
|
||||
backgroundColor = "bg-gray-50",
|
||||
cardColor = "bg-gray-300",
|
||||
textColor = "text-teal-600",
|
||||
arrowColor = "text-gray-600",
|
||||
textColor = "text-gray-700",
|
||||
className = "",
|
||||
cardClassName = "",
|
||||
titleClassName = ""
|
||||
titleClassName = "",
|
||||
svgClassName = "",
|
||||
containerClassName = ""
|
||||
}) => {
|
||||
// Combine steps for mobile layout
|
||||
const mobileSteps = [...leftSteps, ...rightSteps.slice().reverse()];
|
||||
|
||||
return (
|
||||
<section className={`py-6 sm:py-8 lg:py-12 ${backgroundColor} ${className}`}>
|
||||
<div className="container mx-auto max-w-none px-3 sm:px-4 lg:px-6">
|
||||
<h2 className={`text-gray-700 text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
<div className={`container mx-auto max-w-none px-3 sm:px-4 lg:px-6 ${containerClassName}`}>
|
||||
<h2 className={`${textColor} text-left pb-4 sm:pb-6 text-xl sm:text-2xl lg:text-3xl font-normal ${titleClassName}`}>
|
||||
{title}
|
||||
</h2>
|
||||
|
||||
{/* Pipeline Flowchart */}
|
||||
{/* SVG Flowchart Container */}
|
||||
<div className="bg-white rounded-xl shadow-lg p-4 sm:p-6 lg:p-8">
|
||||
<div className="flex justify-center">
|
||||
<div className="w-full max-w-5xl">
|
||||
<div className="relative">
|
||||
{/* Mobile Layout - Single Column */}
|
||||
<div className="block sm:hidden">
|
||||
<div className="flex flex-col items-center space-y-3">
|
||||
{mobileSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 w-full text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < mobileSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Tablet and Desktop Layout - Two Columns */}
|
||||
<div className="hidden sm:block">
|
||||
<div className="grid grid-cols-2 gap-4 sm:gap-6 lg:gap-8">
|
||||
{/* Left Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{leftSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < leftSteps.length - 1 && (
|
||||
<ArrowDown className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
</div>
|
||||
|
||||
{/* Right Column */}
|
||||
<div className="flex flex-col items-center space-y-2 sm:space-y-3">
|
||||
{rightSteps.map((step, index) => (
|
||||
<React.Fragment key={index}>
|
||||
<div className={`${cardColor} rounded-lg p-3 sm:p-4 w-full max-w-80 text-center border ${cardClassName}`}>
|
||||
<h3 className={`text-xs sm:text-sm font-medium ${textColor}`}>{step}</h3>
|
||||
</div>
|
||||
{index < rightSteps.length - 1 && (
|
||||
<ArrowUp className={`w-5 h-5 sm:w-6 sm:h-6 ${arrowColor}`} />
|
||||
)}
|
||||
</React.Fragment>
|
||||
))}
|
||||
<div className="w-full max-w-6xl">
|
||||
{/* SVG Container with responsive sizing */}
|
||||
<div className={`w-full ${svgClassName}`}>
|
||||
{svgUrl ? (
|
||||
// If SVG URL/path is provided
|
||||
<img
|
||||
src={svgUrl}
|
||||
alt="Flowchart diagram"
|
||||
className="w-full h-auto object-contain"
|
||||
/>
|
||||
) : svgContent ? (
|
||||
// If SVG content is provided as JSX
|
||||
<div className="w-full">
|
||||
<div className="w-full">
|
||||
{svgContent}
|
||||
</div>
|
||||
</div>
|
||||
|
||||
{/* Horizontal Arrow positioned between Primary and Secondary Assembly */}
|
||||
<div className="absolute bottom-2 sm:bottom-4 lg:bottom-[0.7rem] left-1/2 transform -translate-x-1/2 flex items-center justify-center">
|
||||
<ArrowRight className={`w-6 h-6 sm:w-8 sm:h-8 ${arrowColor}`} />
|
||||
) : (
|
||||
// Fallback message
|
||||
<div className="flex items-center justify-center h-40 text-gray-500">
|
||||
<p>Please provide SVG content or URL</p>
|
||||
</div>
|
||||
</div>
|
||||
)}
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user