Docker config
This commit is contained in:
mukesh13
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// app/dna-sequencing/whole-genome-sequencing/components/WGSAdvantages.jsx
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import AdvantagesLayout from '../../../components/shared/AdvantagesLayout';
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const WGSAdvantages = () => {
|
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const advantageItems = [
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"Provides a comprehensive, high-resolution view of the genome, surpassing the coverage offered by targeted sequencing.",
|
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"Identifies both small (SNVs, CNVs, InDels) and large structural variants that may be missed with targeted approaches, offering valuable insights into inherited genetic conditions and characterizing mutations driving cancer progression.",
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"Generates large volumes of data quickly, facilitating the assembly of novel genomes.",
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"Uncovers genomic diversity, taxonomic classifications, and evolutionary relationships, enhancing our understanding of biological complexity."
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];
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return (
|
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<AdvantagesLayout
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title="Advantages of Whole Genome Sequencing"
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advantageItems={advantageItems}
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/>
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);
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};
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export default WGSAdvantages;
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// app/dna-sequencing/whole-genome-sequencing/components/WGSIntroduction.jsx
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import IntroductionLayout from '../../../components/shared/IntroductionLayout';
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const WGSIntroduction = () => {
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const contentItems = [
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"Whole Genome Sequencing (WGS) is a comprehensive approach to analyze entire genomes base-by-base, providing a complete genomic view.",
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"The workflow includes isolating DNA, fragmenting it, and sequencing to produce millions of short reads.",
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"In the bioinformatics analysis, these reads are then assembled to construct the genome or aligned to a known reference genome.",
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"It is a powerful tool for diverse genomic studies, capable of sequencing humans, livestock, plants, bacteria, and disease-related microbes."
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];
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return (
|
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<IntroductionLayout
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title="Introduction and Workflow"
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contentItems={contentItems}
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imageUrl="/images/denovo-workflow.png"
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imageAlt="Sample Process Steps"
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useParagraphs={true}
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||||
/>
|
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);
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};
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export default WGSIntroduction;
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// app/dna-sequencing/whole-genome-sequencing/components/WGSSpecifications.jsx
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import Link from 'next/link';
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import SpecificationsLayout from '../../../components/shared/SpecificationsLayout';
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|
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const WGSSpecifications = () => {
|
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const specificationItems = [
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{
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icon: "/images/homepage-2/NGS-Icons-45.svg",
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title: "Sample Requirement",
|
||||
renderContent: () => (
|
||||
<div>
|
||||
<div className="mb-4">
|
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<p className="text-gray-600">Genomic DNA, Cultivated cells, Blood, tissues, and other samples.</p>
|
||||
</div>
|
||||
<div className="mt-4 text-sm">
|
||||
<strong>
|
||||
PLEASE refer to{' '}
|
||||
<Link
|
||||
href="/sample-submission-guideline"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
sample submission guidelines
|
||||
</Link>
|
||||
{' '}or{' '}
|
||||
<Link
|
||||
href="/contact-us"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
Contact Us!
|
||||
</Link>
|
||||
</strong>
|
||||
</div>
|
||||
</div>
|
||||
)
|
||||
},
|
||||
{
|
||||
icon: "/images/homepage-1/service/Advantages-NGS-Icons-20.svg",
|
||||
title: "Sequencing Platform",
|
||||
content: "Illumina NovaSeq 6000/ NovaSeq X"
|
||||
},
|
||||
{
|
||||
icon: "/images/service/social-support.png",
|
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title: "Deliverables",
|
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renderContent: () => (
|
||||
<ul className="list-disc pl-5 space-y-2 text-gray-600 text-start">
|
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<li>The original sequencing data</li>
|
||||
<li>Experimental results</li>
|
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<li>Bioinformatics and Data Analysis Report</li>
|
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<li>Details in Whole Genome Denovo Sequencing (customizable)</li>
|
||||
</ul>
|
||||
)
|
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}
|
||||
];
|
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|
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return (
|
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<SpecificationsLayout
|
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title="Service Specifications"
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specificationItems={specificationItems}
|
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/>
|
||||
);
|
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};
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export default WGSSpecifications;
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// app/dna-sequencing/whole-genome-sequencing/denovo/components/DenovoAdvantages.jsx
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import AdvantagesLayout from '../../../../components/shared/AdvantagesLayout';
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|
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const DenovoAdvantages = () => {
|
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const advantageItems = [
|
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"Eliminates the need for pre-existing reference genomes, which allows for the discovery of novel genetic elements and variations that may not be present in other genomes, providing a truly unbiased view of the genome.",
|
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"Identifies new genes and genetic variations that may be missed by relying on reference genomes alone.",
|
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"Offers high-resolution insights into the genome, including complex regions such as repetitive sequences and heterochromatic regions, which are often challenging to assemble with other sequencing approaches.",
|
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"Enhances our understanding of genetic diversity, facilitates comparative genomics, and contributes significantly to advancements in genomic research across various fields."
|
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];
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return (
|
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<AdvantagesLayout
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title="Advantages of Whole Genome Denovo Sequencing"
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advantageItems={advantageItems}
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/>
|
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);
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};
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export default DenovoAdvantages;
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// app/dna-sequencing/whole-genome-sequencing/denovo/components/DenovoApplications.jsx
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import ApplicationsLayout from '../../../../components/shared/ApplicationsLayout';
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const DenovoApplications = () => {
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const applicationItems = [
|
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"Genome Assembly- Enables the construction of comprehensive and accurate genome assemblies from scratch, essential for understanding the genetic blueprint of organisms where reference genomes are unavailable or incomplete.",
|
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"Genetic Variation Analysis- Facilitates the identification of genetic variants, including single nucleotide polymorphisms (SNPs), insertions, deletions, and structural variants, which are crucial for studying genetic diversity, evolution, and disease.",
|
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"Functional Genomics- Supports the annotation of genes, regulatory elements, and non-coding regions, providing insights into gene function, gene expression regulation, and the roles of various genomic elements in biological processes.",
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"Comparative Genomics- Allows for the comparison of genome sequences across different species or strains, aiding in the identification of evolutionary relationships, adaptation mechanisms, and the conservation of key genomic features.",
|
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"Applications in Diverse Fields- Supports various research applications such as identifying genetic variants associated with diseases, exploring evolutionary relationships, and understanding genetic diversity in populations, making it valuable for personalized medicine, evolutionary studies, and crop improvement."
|
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];
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|
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return (
|
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<ApplicationsLayout
|
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title="Applications of Whole Genome Denovo Sequencing"
|
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applicationItems={applicationItems}
|
||||
/>
|
||||
);
|
||||
};
|
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|
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export default DenovoApplications;
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// app/dna-sequencing/whole-genome-sequencing/denovo/components/DenovoIntroduction.jsx
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|
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import IntroductionLayout from '../../../../components/shared/IntroductionLayout';
|
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|
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const DenovoIntroduction = () => {
|
||||
const contentItems = [
|
||||
"Whole Genome Denovo Sequencing involves sequencing an organism's entire genome from scratch, without a reference genome. This approach is essential for species with unsequenced or incomplete genomes.",
|
||||
"The workflow includes isolating DNA, fragmenting it, and sequencing to produce millions of short reads.",
|
||||
"These reads are then assembled into longer sequences, called contigs, using bioinformatics tools in the genome assembly process.",
|
||||
"It can be used for sequencing diverse species, such as agriculturally important livestock, plants, bacteria, or disease-related microbes."
|
||||
];
|
||||
|
||||
return (
|
||||
<IntroductionLayout
|
||||
title="Introduction and Workflow"
|
||||
contentItems={contentItems}
|
||||
imageUrl="/images/denovo-workflow.png"
|
||||
imageAlt="De Novo Assembly Workflow"
|
||||
badgeText="DE NOVO ASSEMBLY"
|
||||
badgeSubtext="Brochure from whole genome"
|
||||
backgroundColor="#f8f9fa"
|
||||
badgeColor="bg-teal-600"
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default DenovoIntroduction;
|
||||
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|
||||
// app/dna-sequencing/whole-genome-sequencing/denovo/components/DenovoSpecifications.jsx
|
||||
import Link from 'next/link';
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||||
import SpecificationsLayout from '../../../../components/shared/SpecificationsLayout';
|
||||
|
||||
const DenovoSpecifications = () => {
|
||||
const specificationItems = [
|
||||
{
|
||||
icon: "/images/homepage-2/NGS-Icons-45.svg",
|
||||
title: "Sample Requirement",
|
||||
renderContent: () => (
|
||||
<div>
|
||||
<div className="mb-4">
|
||||
<p className="text-gray-600">Genomic DNA, Cultivated cells, Blood, tissues, and other samples.</p>
|
||||
</div>
|
||||
<div className="mt-4 text-sm">
|
||||
<strong>
|
||||
Please refer to{' '}
|
||||
<Link
|
||||
href="/sample-submission-guideline"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
sample submission guidelines
|
||||
</Link>
|
||||
{' '}or{' '}
|
||||
<Link
|
||||
href="/contact-us"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
Contact Us!
|
||||
</Link>
|
||||
</strong>
|
||||
</div>
|
||||
</div>
|
||||
)
|
||||
},
|
||||
{
|
||||
icon: "/images/homepage-1/service/Advantages-NGS-Icons-20.svg",
|
||||
title: "Sequencing Platform",
|
||||
content: "Illumina NovaSeq 6000/ NovaSeq X"
|
||||
},
|
||||
{
|
||||
icon: "/images/service/social-support.png",
|
||||
title: "Deliverables",
|
||||
renderContent: () => (
|
||||
<ul className="list-disc pl-5 space-y-2 text-gray-600 text-start">
|
||||
<li>The original sequencing data</li>
|
||||
<li>Experimental results</li>
|
||||
<li>Bioinformatics and Data Analysis Report</li>
|
||||
<li>Details of Whole Genome Denovo Sequencing (customizable)</li>
|
||||
</ul>
|
||||
)
|
||||
}
|
||||
];
|
||||
|
||||
return (
|
||||
<SpecificationsLayout
|
||||
title="Service Specifications"
|
||||
specificationItems={specificationItems}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default DenovoSpecifications;
|
||||
32
app/dna-sequencing/whole-genome-sequencing/denovo/page.js
Normal file
32
app/dna-sequencing/whole-genome-sequencing/denovo/page.js
Normal file
@ -0,0 +1,32 @@
|
||||
import TitleBar from '../../../components/shared/TitleBar';
|
||||
import DenovoIntroduction from './components/DenovoIntroduction';
|
||||
import DenovoAdvantages from './components/DenovoAdvantages';
|
||||
import DenovoApplications from './components/DenovoApplications';
|
||||
import DenovoSpecifications from './components/DenovoSpecifications';
|
||||
import PageLayout from '../../../components/Layout/PageLayout';
|
||||
|
||||
export default function WholeGenomeDenovoPage() {
|
||||
const breadcrumbs = [
|
||||
{ label: 'Home', href: '/' },
|
||||
{ label: 'Research', href: '/research' },
|
||||
{ label: 'Whole Genome Sequencing', href: '/dna-sequencing/whole-genome-sequencing' },
|
||||
{ label: 'Whole Genome Denovo Sequencing', current: true }
|
||||
];
|
||||
|
||||
return (
|
||||
<PageLayout fixedHeader={true}>
|
||||
<TitleBar
|
||||
title="Whole Genome Denovo Sequencing"
|
||||
desc="Unlocking Genomes, Discovering Diversity"
|
||||
breadcrumbs={breadcrumbs}
|
||||
/>
|
||||
|
||||
<div className="page-content">
|
||||
<DenovoIntroduction />
|
||||
<DenovoAdvantages />
|
||||
<DenovoApplications />
|
||||
<DenovoSpecifications />
|
||||
</div>
|
||||
</PageLayout>
|
||||
);
|
||||
}
|
||||
30
app/dna-sequencing/whole-genome-sequencing/page.js
Normal file
30
app/dna-sequencing/whole-genome-sequencing/page.js
Normal file
@ -0,0 +1,30 @@
|
||||
// app/dna-sequencing/whole-genome-sequencing/page.js (Updated)
|
||||
import TitleBar from '../../components/shared/TitleBar';
|
||||
import WGSIntroduction from './components/WGSIntroduction';
|
||||
import WGSAdvantages from './components/WGSAdvantages';
|
||||
import WGSSpecifications from './components/WGSSpecifications';
|
||||
import PageLayout from '@/app/components/Layout/PageLayout';
|
||||
|
||||
export default function WholeGenomeSequencingPage() {
|
||||
const breadcrumbs = [
|
||||
{ label: 'Home', href: '/' },
|
||||
{ label: 'Research', href: '/research' },
|
||||
{ label: 'Whole Genome Sequencing', current: true }
|
||||
];
|
||||
|
||||
return (
|
||||
<PageLayout fixedHeader={true}>
|
||||
<TitleBar
|
||||
title="Whole Genome Sequencing"
|
||||
desc="Whole Genome, Whole Insights"
|
||||
breadcrumbs={breadcrumbs}
|
||||
/>
|
||||
|
||||
<div className="page-content">
|
||||
<WGSIntroduction />
|
||||
<WGSAdvantages />
|
||||
<WGSSpecifications />
|
||||
</div>
|
||||
</PageLayout>
|
||||
);
|
||||
}
|
||||
@ -0,0 +1,20 @@
|
||||
// ResequencingAdvantages.jsx
|
||||
import AdvantagesLayout from '../../../../components/shared/AdvantagesLayout';
|
||||
|
||||
const ResequencingAdvantages = () => {
|
||||
const advantageItems = [
|
||||
"Provides a detailed examination of an organism's entire genome, revealing all genetic variations compared to a reference genome.",
|
||||
"Enables accurate identification of single nucleotide polymorphisms (SNPs), insertions, deletions, and structural variants, crucial for understanding genetic diversity and disease mechanisms.",
|
||||
"Facilitates the discovery of genetic markers associated with diseases, guiding personalized treatment approaches.",
|
||||
"Supports diverse studies including evolutionary biology, agricultural genetics, and microbial genomics, enhancing insights into genetic adaptations and relationships across species."
|
||||
];
|
||||
|
||||
return (
|
||||
<AdvantagesLayout
|
||||
title="Advantages of Whole Genome ReSequencing"
|
||||
advantageItems={advantageItems}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default ResequencingAdvantages;
|
||||
@ -0,0 +1,22 @@
|
||||
// ResequencingApplications.jsx
|
||||
|
||||
import ApplicationsLayout from '../../../../components/shared/ApplicationsLayout';
|
||||
|
||||
const ResequencingApplications = () => {
|
||||
const applicationItems = [
|
||||
"Genetic Variation Discovery- Identifies and characterizes genetic variations, including single nucleotide polymorphisms (SNPs), insertions, deletions, and structural variants, across different individuals or populations, aiding in the study of genetic diversity and evolution.",
|
||||
"Disease Research- Helps in pinpointing genetic mutations and variants associated with genetic disorders, complex diseases, and rare conditions, enhancing our understanding of disease mechanisms and enabling the development of targeted therapies.",
|
||||
"Personalized Medicine- Facilitates the tailoring of medical treatments based on an individual's genetic profile, allowing for more precise and effective interventions and drug responses.",
|
||||
"Population Genetics- Assists in studying the genetic makeup of populations to understand evolutionary processes, migration patterns, and adaptation to environmental changes, providing insights into the genetic basis of traits and diseases.",
|
||||
"Agricultural Genomics- Identifies genetic markers linked to desirable traits and maps quantitative trait loci (QTL) to enhance selective breeding and improve characteristics such as yield, disease resistance, and stress tolerance. It also supports genome-wide association studies (GWAS) to connect genetic variants with specific traits or diseases."
|
||||
];
|
||||
|
||||
return (
|
||||
<ApplicationsLayout
|
||||
title="Applications of Whole Genome ReSequencing"
|
||||
applicationItems={applicationItems}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default ResequencingApplications;
|
||||
@ -0,0 +1,28 @@
|
||||
// ResequencingIntroduction.jsx
|
||||
|
||||
import IntroductionLayout from '../../../../components/shared/IntroductionLayout';
|
||||
|
||||
const ResequencingIntroduction = () => {
|
||||
const contentItems = [
|
||||
"Whole Genome Resequencing involves sequencing an organism's entire genome where reference genome is already available. Unlike de novo sequencing, which builds a genome from scratch, resequencing focuses on identifying variations and differences compared to a previously known reference genome.",
|
||||
"The workflow involves DNA isolation, fragmentation, and sequencing to generate millions of short reads.",
|
||||
"These reads undergo alignment to a reference genome, followed by the analysis of genetic variations using advanced bioinformatics tools.",
|
||||
"It enables detailed analysis of genetic variations across diverse species like humans, plants, and bacteria."
|
||||
];
|
||||
|
||||
return (
|
||||
<IntroductionLayout
|
||||
title="Introduction and Workflow"
|
||||
contentItems={contentItems}
|
||||
imageUrl="/images/resequencing-workflow.png"
|
||||
imageAlt="Resequencing Workflow"
|
||||
badgeText="RESEQUENCING"
|
||||
badgeSubtext="Change only sequencing and analysis by adding it from whole exome"
|
||||
backgroundColor="#f8f9fa"
|
||||
badgeColor="bg-teal-600"
|
||||
useParagraphs={true}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default ResequencingIntroduction;
|
||||
@ -0,0 +1,63 @@
|
||||
// ResequencingSpecifications.jsx
|
||||
import Link from 'next/link';
|
||||
import SpecificationsLayout from '../../../../components/shared/SpecificationsLayout';
|
||||
|
||||
const ResequencingSpecifications = () => {
|
||||
const specificationItems = [
|
||||
{
|
||||
icon: "/images/homepage-2/NGS-Icons-45.svg",
|
||||
title: "Sample Requirement",
|
||||
renderContent: () => (
|
||||
<div>
|
||||
<div className="mb-4">
|
||||
<p className="text-gray-600">Genomic DNA, Cultivated cells, Blood, tissues, and other samples.</p>
|
||||
</div>
|
||||
<div className="mt-4 text-sm">
|
||||
<strong>
|
||||
Please refer to{' '}
|
||||
<Link
|
||||
href="/sample-submission-guideline"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
sample submission guidelines
|
||||
</Link>
|
||||
{' '}or{' '}
|
||||
<Link
|
||||
href="/contact-us"
|
||||
className="text-teal-600 underline hover:text-teal-700"
|
||||
>
|
||||
Contact Us!
|
||||
</Link>
|
||||
</strong>
|
||||
</div>
|
||||
</div>
|
||||
)
|
||||
},
|
||||
{
|
||||
icon: "/images/homepage-1/service/Advantages-NGS-Icons-20.svg",
|
||||
title: "Sequencing Platform",
|
||||
content: "Illumina NovaSeq 6000/ NovaSeq X"
|
||||
},
|
||||
{
|
||||
icon: "/images/service/social-support.png",
|
||||
title: "Deliverables",
|
||||
renderContent: () => (
|
||||
<ul className="list-disc pl-5 space-y-2 text-gray-600 text-start">
|
||||
<li>The original sequencing data</li>
|
||||
<li>Experimental results</li>
|
||||
<li>Bioinformatics and Data Analysis Report</li>
|
||||
<li>Details of Whole Genome ReSequencing (customizable)</li>
|
||||
</ul>
|
||||
)
|
||||
}
|
||||
];
|
||||
|
||||
return (
|
||||
<SpecificationsLayout
|
||||
title="Service Specifications"
|
||||
specificationItems={specificationItems}
|
||||
/>
|
||||
);
|
||||
};
|
||||
|
||||
export default ResequencingSpecifications;
|
||||
@ -0,0 +1,32 @@
|
||||
import TitleBar from '../../../components/shared/TitleBar';
|
||||
import ResequencingIntroduction from './components/ResequencingIntroduction';
|
||||
import ResequencingAdvantages from './components/ResequencingAdvantages';
|
||||
import ResequencingApplications from './components/ResequencingApplications';
|
||||
import ResequencingSpecifications from './components/ResequencingSpecifications';
|
||||
import PageLayout from '../../../components/Layout/PageLayout';
|
||||
|
||||
export default function WholeGenomeResequencingPage() {
|
||||
const breadcrumbs = [
|
||||
{ label: 'Home', href: '/' },
|
||||
{ label: 'Research', href: '/research' },
|
||||
{ label: 'Whole Genome Sequencing', href: '/dna-sequencing/whole-genome-sequencing' },
|
||||
{ label: 'Whole Genome ReSequencing', current: true }
|
||||
];
|
||||
|
||||
return (
|
||||
<PageLayout fixedHeader={true}>
|
||||
<TitleBar
|
||||
title="Whole Genome ReSequencing"
|
||||
desc="Unraveling Genomic Complexity with Re-Sequencing"
|
||||
breadcrumbs={breadcrumbs}
|
||||
/>
|
||||
|
||||
<div className="page-content">
|
||||
<ResequencingIntroduction />
|
||||
<ResequencingAdvantages />
|
||||
<ResequencingApplications />
|
||||
<ResequencingSpecifications />
|
||||
</div>
|
||||
</PageLayout>
|
||||
);
|
||||
}
|
||||
Reference in New Issue
Block a user